Md Hasin Abrar

State College, Pennsylvania

I am a fifth-year Ph.D. student at the Department of CSE, Pennsylvania State University. Currently, I am working as a Graduate Research Assistant under the supervision of Dr. Paul Medvedev. My research interest lies in Computational Biology. In particular, I am working on learned data structure for bioinformatics problems. You can find my updated CV here.

Besides academia, I love traveling, playing board games and football (soccer). I am a huge Manchester United Football Club fan.


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Experience

Research Assistant

Department of CSE, Pennsylvania State University

Currently I am working as a graduate research assistant in Pennsylvania State University. My works mainly focus on learned data structures for bioinformatics problems.

June 2022 - Present

Teaching Assistant

Department of CSE, Pennsylvania State University

I have taken recitations (lectures) throughtout the semesters. Moreover, I have helped with the course questions and grading.

August 2021 - May 2022

Lecturer

Department of CSE, Ahsanullah University of Science and Technology

I took muliple courses and labs. I also worked as an advisor for multiple students. Additinally, I Was involved with student progamming development programs.

July 2019 - July 2021

Software Engineer

Enosis Solutions

In my little time here, I worked on developing websites.

May 2019 - June 2019

Publications

Md. Hasin Abrar, Paul Medvedev, Giorgio Vinciguerra Efficiency of Learned Indexes on Genome Spectra. 33rd Annual European Symposium on Algorithms (ESA 2025) [link] (Authors names are in alphabetical order)

Md. Hasin Abrar, Paul Medvedev PLA-index: A k-mer Index Exploiting Rank Curve Linearity. WABI 2024 [link]

Md. Hasin Abrar, Paul Medvedev PLA-complexity of k-mer multisets. Overlay, RECOMB-Seq 2024 [link]

Tasfia Zahin*, Md. Hasin Abrar*, Mizanur Rahman, Tahrina Tasnim, Md. Shamsuzzoha Bayzid, Atif Rahman An alignment-free method for phylogeny estimation using maximum likelihood. BMC bioinformatics [link] (*Authors contributed equally)

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Contact

Office

Room 506, Wartik Laboratory, State College, PA 16801

Email